From fa92d7c67a9609eade12eaba7b36d70c05a2a873 Mon Sep 17 00:00:00 2001 From: Charles Plessy Date: Mon, 2 May 2022 15:59:03 +0900 Subject: [PATCH] Now in PubMed. --- biblio/{10.1101_2020.12.23.423594.mdwn => 33752599.mdwn} | 2 +- tags/Oikopleura.mdwn | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) rename biblio/{10.1101_2020.12.23.423594.mdwn => 33752599.mdwn} (94%) diff --git a/biblio/10.1101_2020.12.23.423594.mdwn b/biblio/33752599.mdwn similarity index 94% rename from biblio/10.1101_2020.12.23.423594.mdwn rename to biblio/33752599.mdwn index 77093509..88029aa7 100644 --- a/biblio/10.1101_2020.12.23.423594.mdwn +++ b/biblio/33752599.mdwn @@ -1,5 +1,5 @@ [[!meta title="SLIDR and SLOPPR: Flexible identification of spliced leader trans-splicing and prediction of eukaryotic operons from RNA-Seq data"]] -[[!tag Oikopleura bioRxiv]] +[[!tag Oikopleura trans-splicing]] Marius Wenzel, Berndt Mueller, Jonathan Pettitt diff --git a/tags/Oikopleura.mdwn b/tags/Oikopleura.mdwn index f30ea46a..b64a39a4 100644 --- a/tags/Oikopleura.mdwn +++ b/tags/Oikopleura.mdwn @@ -319,7 +319,7 @@ Transcriptome The SL gene is found downstream of the 5S RNA gene, which is repeated multiple times in the genome. The 3′ acceptor site has a strong UUU(C/U/A)AG consensus. Reported intercistronic regions are short: <30 nt ([[Ganot et al., 2004|biblio/15314184]]) - or ~33 nt ([[Wenzel, Mueller and Pettitt, 2020|biblio/10.1101_2020.12.23.423594]]). + or ~33 nt ([[Wenzel, Mueller and Pettitt, 2020|biblio/33752599]]). - The splice leader found in the Norwegian strain by ([[Ganot et al., 2004|biblio/15314184]]) was found indentical in a Japanese strain by ([[Wang and coll., 2015|biblio/26032664]]). - A study using CAGE found that 39% of annotated gene models are trans-spliced with the -- 2.47.3