From 7b961f169290554cb8025f0c00ebe34894057b18 Mon Sep 17 00:00:00 2001 From: Charles Plessy Date: Mon, 2 May 2022 13:26:29 +0900 Subject: [PATCH] Trans-splicing consensus site. --- biblio/15314184.mdwn | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/biblio/15314184.mdwn b/biblio/15314184.mdwn index 7d63dcd1..cb28db59 100644 --- a/biblio/15314184.mdwn +++ b/biblio/15314184.mdwn @@ -7,4 +7,4 @@ Mol Cell Biol. 2004 Sep;24(17):7795-805. doi:10.1128/MCB.24.17.7795-7805.2004 Spliced-Leader RNA trans Splicing in a Chordate, Oikopleura dioica, with a Compact Genome. -[[!pmid 15314184 desc="5′ splice leader (SL) found in 90/158 ESTs containing a start codon. The SL RNA is found downstream of the 5S RNA in at least 40 occurences, and aproximately 2/3 of all the 5S rRNA genes. Its sequence is ACTCATCCCATTTTTGAGTCCGATTTCGATTGTCTAACAG. O. doica is the first chordate where gene operons have been described. Intercistronic regions are very short (<30 nt)."]] +[[!pmid 15314184 desc="5′ splice leader (SL) found in 90/158 ESTs containing a start codon. The SL RNA is found downstream of the 5S RNA in at least 40 occurences, and aproximately 2/3 of all the 5S rRNA genes. Its sequence is ACTCATCCCATTTTTGAGTCCGATTTCGATTGTCTAACAG. O. doica is the first chordate where gene operons have been described. Intercistronic regions are very short (<30 nt). “In comparing 52 distinct trans-splice acceptor sites to 605 cis-splice acceptor sites, the same consensus sequence, TTT(C/T/A)AG, was observed at both intron and intercistronic region 3′ ends. A notable difference from cis splicing was that most exons trans spliced to the leader (133 of 145) started with an adenosine, whereas the start of cis-spliced exons did not show any nucleotide preference”"]] -- 2.47.3