From 5b4929a69cbb99cc6573eeafecf250f27f020ec0 Mon Sep 17 00:00:00 2001 From: Charles Plessy Date: Wed, 25 Oct 2017 09:12:26 +0900 Subject: [PATCH] Old --- biblio/15781865.mdwn | 10 ++++++++++ biblio/To_Do | 3 --- 2 files changed, 10 insertions(+), 3 deletions(-) create mode 100644 biblio/15781865.mdwn diff --git a/biblio/15781865.mdwn b/biblio/15781865.mdwn new file mode 100644 index 00000000..8553a13d --- /dev/null +++ b/biblio/15781865.mdwn @@ -0,0 +1,10 @@ +[[!meta title="Identification of the mismatch repair genes PMS2 and MLH1 as p53 target genes by using serial analysis of binding elements."]] +[[!tag sequence_tags ChIP epigenetic]] + +Proc Natl Acad Sci U S A. 2005 Mar 29;102(13):4813-8 doi:10.1073/pnas.0407069102 + +Chen J, Sadowski I. + +Identification of the mismatch repair genes PMS2 and MLH1 as p53 target genes by using serial analysis of binding elements. + +[[!pmid 15781865 desc="Ancestor of ChIP-seq. Ditags without a spacer, separated by a 4-cutter (TalI)"]] diff --git a/biblio/To_Do b/biblio/To_Do index 7635d847..313a7f07 100644 --- a/biblio/To_Do +++ b/biblio/To_Do @@ -361,9 +361,6 @@ Future Nobel prize ? Maybe an explanation for the conservation of dev. enhancers 15778292 [genome] 2n species covered 1x would be more efficient than n covered 2x for the discovery of conserved elements, but the resulting genome assemblies would be of a much poorer qualities. -15781865 [tags] -Not tested on a large scale. Ditags without a spacer, separated by a 4-cutter (TalI) - 15564293 [misc] [not read] Normalisations based on uni/multivariate models, rather than substraction of the mean followed by divisoin by sd, are much more effective at detecting covariations. -- 2.47.3