From 4e3a268244d53424f58fd2588277d61a21be1b56 Mon Sep 17 00:00:00 2001 From: Charles Plessy Date: Tue, 3 Oct 2017 10:05:13 +0900 Subject: [PATCH] Old --- biblio/15070753.mdwn | 10 ++++++++++ biblio/To_Do | 6 ------ 2 files changed, 10 insertions(+), 6 deletions(-) create mode 100644 biblio/15070753.mdwn diff --git a/biblio/15070753.mdwn b/biblio/15070753.mdwn new file mode 100644 index 00000000..2e16c75b --- /dev/null +++ b/biblio/15070753.mdwn @@ -0,0 +1,10 @@ +[[!meta title="Genome-wide identification of DNaseI hypersensitive sites using active chromatin sequence libraries."]] +[[!tag library epigenetic DNAse-hypersensitivity]] + +Sabo PJ, Humbert R, Hawrylycz M, Wallace JC, Dorschner MO, McArthur M, Stamatoyannopoulos JA. + +Proc Natl Acad Sci U S A. 2004 Mar 30;101(13):4537-42 + +Genome-wide identification of DNaseI hypersensitive sites using active chromatin sequence libraries. + +[[!pmid 15070753 desc="Library of DNAseI ends, to map hypersensitive sites. Substrraction with a HS-depleted tester."]] diff --git a/biblio/To_Do b/biblio/To_Do index d16ba759..524dacc7 100644 --- a/biblio/To_Do +++ b/biblio/To_Do @@ -104,9 +104,6 @@ Direct labeling of 10µg total RNA. 15272081 [libraries] 81% of the 5'/3' tag pairs could be used to amplify a cDNA by RT-PCR. -14973331 [libraries] -cDNAs substracted by their former templates. DNS cleaves DNA from DNA/RNA duplexes, leaving RNA molecules intact. This would suggest the strong reduction of abundant transcripts. - 8125298 [libraries] Oligo capping primary paper. @@ -125,9 +122,6 @@ Engeneered T7 used to generate dye-terminated amplification products. 15271495 [single cell] Review -15070753 [libraries] -Library of DNAseI ends, to map hypersensitive sites. Substrraction with a HS-depleted tester. - 15256515 [genome] [tracked] Analysis of the distribution of all possible 8-mers in human proximal promoters. Identifiers 9 clusters of sequence. TATA found only in 2.6% of the promoters. -- 2.47.3