From 4621a70369b0f5b46089b9d1b04654c24b073baf Mon Sep 17 00:00:00 2001 From: Charles Date: Thu, 10 Jan 2019 13:46:56 +0900 Subject: [PATCH] =?utf8?q?Caf=C3=A9?= MIME-Version: 1.0 Content-Type: text/plain; charset=utf8 Content-Transfer-Encoding: 8bit --- biblio/26059717.mdwn | 2 ++ tags/assembly.mdwn | 4 ++++ 2 files changed, 6 insertions(+) diff --git a/biblio/26059717.mdwn b/biblio/26059717.mdwn index 7e725d2f..5ad2a2b6 100644 --- a/biblio/26059717.mdwn +++ b/biblio/26059717.mdwn @@ -1,6 +1,8 @@ [[!meta title="BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs."]] [[!tag assembly]] +Simão FA, Waterhouse RM, Ioannidis P, Kriventseva EV, Zdobnov EM. + Bioinformatics. 2015 Oct 1;31(19):3210-2. doi:10.1093/bioinformatics/btv351 BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs. diff --git a/tags/assembly.mdwn b/tags/assembly.mdwn index 4a703d7c..b1daa021 100644 --- a/tags/assembly.mdwn +++ b/tags/assembly.mdwn @@ -7,4 +7,8 @@ _In progress..._ The HaploMerger2 pipeline ([[Huang and coll., 2017|biblio/28407147]]) takes a diploid assembly and outputs a reference and an alternative assembly for each haplotype. +BUSCO ([[Simão and coll., 2015|biblio/26059717]]), ([[Waterhouse and coll., +2017|29220515]]) assesses the presence of evolutionary conserved single-copy +genes in the assemblies. + [[!inline pages="tagged(assembly)" actions="no" limit=0]] -- 2.47.3