From: Charles Date: Fri, 5 Jul 2019 06:38:21 +0000 (+0900) Subject: Pendant que LabDroid travaille... X-Git-Url: https://source.charles.plessy.org/?a=commitdiff_plain;h=feb87dddcced48ec948571e74e27f454636f0e00;p=setup%2F.git Pendant que LabDroid travaille... --- diff --git a/biblio/12915488.mdwn b/biblio/12915488.mdwn new file mode 100644 index 00000000..0cd3248f --- /dev/null +++ b/biblio/12915488.mdwn @@ -0,0 +1,10 @@ +[[!meta title="Transcript mapping and genome annotation of ascidian mtDNA using EST data."]] +[[!tag mitochondrion]] + +Genome Res. 2003 Sep;13(9):2203-12. doi:10.1101/gr.1227803 + +Gissi C, Pesole G. + +Transcript mapping and genome annotation of ascidian mtDNA using EST data. + +[[!pmid 12915488 desc="Observation of polycistronic precursor and mature RNAs in ascidians."]] diff --git a/tags/mitochondrion.mdwn b/tags/mitochondrion.mdwn index 7c9a5b69..ebde925a 100644 --- a/tags/mitochondrion.mdwn +++ b/tags/mitochondrion.mdwn @@ -1,14 +1,14 @@ [[!meta title="pages tagged mitochondrion"]] -The ascidian genetic code -------------------------- +The tunicate mitochondrial genome +--------------------------------- + +### Genetic code https://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html/index.cgi?chapter=cgencodes#SG13 https://en.wikipedia.org/wiki/Ascidian_mitochondrial_code -(work in progress) - - [[Yokobori and coll, 1993|biblio/8381878]] sequenced _cox1_ in _Halocynthia roretzi_ and suggested that it may use a different genetic code. The same year, [[Durrheim and coll. |biblio/8393993]] made @@ -29,11 +29,17 @@ https://en.wikipedia.org/wiki/Ascidian_mitochondrial_code - Another case, unrelated, of reassignment to glycin is know: UGA -> Gly in SR1 bacteria ([[Campbell and coll, 2013|biblio/23509275]]). +### Gene order + - _cox2_ and _cytb_ are usually adjascent in tunicates, but they were found to be separated in the ascidians _Herdmania momus_ ([[Singh and coll, 2009|biblio/19922605]]) or _Lissoclinum patella_ ([[Kwan and coll, 2014|biblio/24788869]]). -To read: Durrheim/8393993 (P. stol code), Gissi/12915488 (alt. start codon) +### Transcription + + - EST data shows the presence of polycistronic precursor and mature RNAs + ([[Gissi & Pessole, 2003|biblio/12915488]]). + [[!inline pages="tagged(mitochondrion)" limit=0]]