From: Charles Date: Wed, 27 Nov 2019 03:25:00 +0000 (+0900) Subject: LAVA elements. X-Git-Url: https://source.charles.plessy.org/?a=commitdiff_plain;h=dcec352eb915feea7fd81e879dbeb623f20d6fe5;p=source.git LAVA elements. --- diff --git a/biblio/25209798.mdwn b/biblio/25209798.mdwn index 0c95e810..487e4faf 100644 --- a/biblio/25209798.mdwn +++ b/biblio/25209798.mdwn @@ -1,5 +1,5 @@ [[!meta title="Gibbon genome and the fast karyotype evolution of small apes."]] -[[!tag chromosome synteny evolution]] +[[!tag chromosome synteny evolution repeat]] Carbone L, Harris RA, Gnerre S, Veeramah KR, Lorente-Galdos B, Huddleston J, Meyer TJ, Herrero J, Roos C, Aken B, Anaclerio F, Archidiacono N, Baker C, @@ -20,4 +20,4 @@ Nature. 2014 Sep 11;513(7517):195-201. doi:10.1038/nature13679 Gibbon genome and the fast karyotype evolution of small apes. -[[!pmid 25209798 desc="“We identified 96 gibbon–human synteny breakpoints in Nleu1.0.” “Segmental duplication enrichment was the best predictor of gibbon–human synteny breakpoints,[...] however, breakpoints were also enriched for Alu elements.” “ The majority of gibbon chromosomal breakpoints bore signatures of non-homology based mechanisms.” “We observed an enrichment of gibbon–human breakpoints in CTCF-binding events.”"]] +[[!pmid 25209798 desc="“We identified 96 gibbon–human synteny breakpoints in Nleu1.0.” “Segmental duplication enrichment was the best predictor of gibbon–human synteny breakpoints,[...] however, breakpoints were also enriched for Alu elements.” “ The majority of gibbon chromosomal breakpoints bore signatures of non-homology based mechanisms.” “We observed an enrichment of gibbon–human breakpoints in CTCF-binding events.” Insertion of LAVA (3'-L1-AluS-VNTR-Alu-like-5') elements in genes related to cell division might have caused the accelerated evolution of the karyotype in gibbons."]]