From: Charles Plessy Date: Mon, 18 Nov 2024 06:50:03 +0000 (+0900) Subject: Mightychondrion X-Git-Url: https://source.charles.plessy.org/?a=commitdiff_plain;h=d2c3cffd4727efb5d3fe2c6f915aa31e0710e5d7;p=setup%2F.git Mightychondrion --- diff --git a/biblio/10.1093_plankt_fbae057.mdwn b/biblio/10.1093_plankt_fbae057.mdwn new file mode 100644 index 00000000..93907a3a --- /dev/null +++ b/biblio/10.1093_plankt_fbae057.mdwn @@ -0,0 +1,10 @@ +[[!meta title="Know your limits; miniCOI metabarcoding fails with key marine zooplankton taxa"]] +[[!tag Oikopleura mitochondrion]] + +Aitor Albaina, Rade Garić, Lidia Yebra + +Journal of Plankton Research, 2024;, fbae057 doi: 10.1093/plankt/fbae057 + +Know your limits; miniCOI metabarcoding fails with key marine zooplankton taxa + +[[!doi 10.1093/plankt/fbae057 desc="Reports poly-T insertions in _O. dioica_, _O. albicans_, _Stegosoma magna_, _Appendicularia sicula_, _Fritillaria borealis saragossi_, _Fritillaria pellucida_, and _Fritillaria formica tuberculata_."]] diff --git a/tags/Oikopleura.mdwn b/tags/Oikopleura.mdwn index 7fd5a6e2..79e407a3 100644 --- a/tags/Oikopleura.mdwn +++ b/tags/Oikopleura.mdwn @@ -171,6 +171,11 @@ Mitogenome mitochondrial sequences can be translated with the ascidian genetic code, and suggests that _O. lon_, _B. sty_ and perhaps _M. ery_ (all in the _Coecaria_ genus) use different code(s). + - [[Albaina, Garić and Yebra, 2024|10.1093_plankt_fbae057]] report poly-T + insertions in _O. dioica_, _O. albicans_, _Stegosoma magna_, _Appendicularia + sicula_, _Fritillaria borealis saragossi_, _Fritillaria pellucida_, and + _Fritillaria formica tuberculata_, but not in _O. longicauda_ and other members + of the _Coecaria_ group. Repeat elements --------------- diff --git a/tags/mitochondrion.mdwn b/tags/mitochondrion.mdwn index 9686a5ba..e75b100f 100644 --- a/tags/mitochondrion.mdwn +++ b/tags/mitochondrion.mdwn @@ -89,6 +89,10 @@ Echinoderms S S I N W - [[Diercksens and coll., 2024|biblio/39162185]] and [[Klirs and coll., 2024|biblio/39162337]] found that occasional presences of Cs in the poly-T regions does not block editing. + - [[Albaina, Garić and Yebra, 2024|10.1093_plankt_fbae057]] report poly-T + insertions in _O. dioica_, _O. albicans_, _Stegosoma magna_, _Appendicularia + sicula_, _Fritillaria borealis saragossi_, _Fritillaria pellucida_, and + _Fritillaria formica tuberculata_. ## Other