From: Charles Plessy Date: Sat, 23 Dec 2023 06:32:57 +0000 (+0900) Subject: Cleanup, simplification, consolidation. X-Git-Url: https://source.charles.plessy.org/?a=commitdiff_plain;h=610e2bcda9a6e475100163ac88e3d78c524fe078;p=source.git Cleanup, simplification, consolidation. --- diff --git a/biblio/18615017.mdwn b/biblio/18615017.mdwn index 03256b31..dc995b64 100644 --- a/biblio/18615017.mdwn +++ b/biblio/18615017.mdwn @@ -1,5 +1,5 @@ [[!meta title="High-resolution mapping of meiotic crossovers and non-crossovers in yeast."]] -[[!tag Yeast chromosome microarray genetics]] +[[!tag yeast chromosome microarray genetics]] Mancera E, Bourgon R, Brozzi A, Huber W, Steinmetz LM. diff --git a/biblio/20937878.mdwn b/biblio/20937878.mdwn index c66e29a9..7e6cf7d3 100644 --- a/biblio/20937878.mdwn +++ b/biblio/20937878.mdwn @@ -1,3 +1,3 @@ [[!meta title="Cell-permeable Foxp3 protein alleviates autoimmune disease associated with inflammatory bowel disease and allergic airway inflammation."]] -[[!tag lymphocyte FoxP3 Treg therapy]] +[[!tag lymphocyte FoxP3 therapy]] [[!pmid 20937878 desc=""]] diff --git a/biblio/22761473.mdwn b/biblio/22761473.mdwn index 316bb186..72cc0c21 100644 --- a/biblio/22761473.mdwn +++ b/biblio/22761473.mdwn @@ -1,5 +1,5 @@ [[!meta title="A New Approach to Simultaneously Quantify Both TCR α- and β-Chain Diversity after Adoptive Immunotherapy."]] -[[!tag TCR clonotype]] +[[!tag TCR repertoire]] Zhang M, Maiti S, Bernatchez C, Huls H, Rabinovich B, Champlin RE, Vence LM, Hwu P, Radvanyi L, Cooper LJ. @@ -7,4 +7,4 @@ Clin Cancer Res. 2012 Sep 1;18(17):4733-42. A New Approach to Simultaneously Quantify Both TCR α- and β-Chain Diversity after Adoptive Immunotherapy. -[[!pmid 22761473 desc="Using “NanoStrings” to count α and β segments."]] +[[!pmid 22761473 desc="Using “NanoStrings” to count α and β segments. Clonotypes"]] diff --git a/biblio/22933635.mdwn b/biblio/22933635.mdwn index 1e1e7216..2cd52b7e 100644 --- a/biblio/22933635.mdwn +++ b/biblio/22933635.mdwn @@ -1,5 +1,5 @@ [[!meta title="The TCR repertoires of regulatory and conventional T cells specific for the same foreign antigen are distinct."]] -[[!tag mouse Treg TCR α_chain repertoire]] +[[!tag mouse lymphocyte TCR α_chain repertoire]] Relland LM, Williams JB, Relland GN, Haribhai D, Ziegelbauer J, Yassai M, Gorski J, Williams CB. diff --git a/biblio/23290140.mdwn b/biblio/23290140.mdwn index 63804636..ea7d2d1f 100644 --- a/biblio/23290140.mdwn +++ b/biblio/23290140.mdwn @@ -1,5 +1,5 @@ [[!meta title="Generation of rejuvenated antigen-specific T cells by reprogramming to pluripotency and redifferentiation."]] -[[!tag iPS T_cell reprogramming]] +[[!tag iPS lymphocyte reprogramming]] Nishimura T, Kaneko S, Kawana-Tachikawa A, Tajima Y, Goto H, Zhu D, Nakayama-Hosoya K, Iriguchi S, Uemura Y, Shimizu T, Takayama N, Yamada D, Nishimura K, Ohtaka M, Watanabe N, Takahashi S, Iwamoto A, Koseki H, Nakanishi M, Eto K, Nakauchi H. diff --git a/biblio/24156252.mdwn b/biblio/24156252.mdwn index aa7583ed..4ee8ad75 100644 --- a/biblio/24156252.mdwn +++ b/biblio/24156252.mdwn @@ -1,5 +1,5 @@ [[!meta title="Temporal dynamics and transcriptional control using single-cell gene expression analysis."]] -[[!tag single_cell OSC CLST]] +[[!tag single_cell OSC]] Kouno T, de Hoon M, Mar JC, Tomaru Y, Kawano M, Carninci P, Suzuki H, Hayashizaki Y, Shin JW. diff --git a/biblio/27071608.mdwn b/biblio/27071608.mdwn index f3103177..69fcb3b8 100644 --- a/biblio/27071608.mdwn +++ b/biblio/27071608.mdwn @@ -1,5 +1,5 @@ [[!meta title="Bioanalyzer chips can be used interchangeably for many analyses of DNA or RNA."]] -[[!tag Bioanalyzer method]] +[[!tag size method]] Davies J, Denyer T, Hadfield J diff --git a/biblio/28623350.mdwn b/biblio/28623350.mdwn index 49d9f8db..c696260a 100644 --- a/biblio/28623350.mdwn +++ b/biblio/28623350.mdwn @@ -1,5 +1,5 @@ [[!meta title="Multiplexed Spliced-Leader Sequencing: A high-throughput, selective method for RNA-seq in Trypanosomatids."]] -[[!tag trans-splicing method random priming.]] +[[!tag trans-splicing method random_priming]] Cuypers B, Domagalska MA, Meysman P, Muylder G, Vanaerschot M, Imamura H, Dumetz F, Verdonckt TW, Myler PJ, Ramasamy G, Laukens K, Dujardin JC. diff --git a/biblio/33093512.mdwn b/biblio/33093512.mdwn index 9e32a576..ab2bc187 100644 --- a/biblio/33093512.mdwn +++ b/biblio/33093512.mdwn @@ -1,5 +1,5 @@ [[!meta title="Use of Cap Analysis Gene Expression to detect human papillomavirus promoter activity patterns at different disease stages."]] -[[!tag RIKEN OIST nanoCAGE HPV]] +[[!tag OIST nanoCAGE HPV]] Taguchi A, Nagasaka K, Plessy C, Nakamura H, Kawata Y, Kato S, Hashimoto K, Nagamatsu T, Oda K, Kukimoto I, Kawana K, Carninci P, Osuga Y, Fujii T. diff --git a/biblio/8894123.mdwn b/biblio/8894123.mdwn index 10498a0f..116cd5f8 100644 --- a/biblio/8894123.mdwn +++ b/biblio/8894123.mdwn @@ -1,5 +1,5 @@ [[!meta title="Zipf-scaling behavior in the immune system."]] -[[!tag T_cell repertoire scale-free]] +[[!tag lymphocyte repertoire scale-free]] Burgos JD, Moreno-Tovar P. diff --git a/tags/Bioanalyzer.mdwn b/tags/Bioanalyzer.mdwn deleted file mode 100644 index 05e91ae0..00000000 --- a/tags/Bioanalyzer.mdwn +++ /dev/null @@ -1,4 +0,0 @@ -[[!meta title="pages tagged Bioanalyzer"]] - -[[!inline pages="tagged(Bioanalyzer)" actions="no" archive="yes" -feedshow=10]] diff --git a/tags/CLST.mdwn b/tags/CLST.mdwn deleted file mode 100644 index 4af404bc..00000000 --- a/tags/CLST.mdwn +++ /dev/null @@ -1,4 +0,0 @@ -[[!meta title="pages tagged CLST"]] - -[[!inline pages="tagged(CLST)" actions="no" archive="yes" -feedshow=10]] diff --git a/tags/RIKEN.mdwn b/tags/RIKEN.mdwn deleted file mode 100644 index b77112a6..00000000 --- a/tags/RIKEN.mdwn +++ /dev/null @@ -1,4 +0,0 @@ -[[!meta title="pages tagged RIKEN"]] - -[[!inline pages="tagged(RIKEN)" actions="no" archive="yes" -feedshow=10]] diff --git a/tags/T_cell.mdwn b/tags/T_cell.mdwn deleted file mode 100644 index 1244a948..00000000 --- a/tags/T_cell.mdwn +++ /dev/null @@ -1,4 +0,0 @@ -[[!meta title="pages tagged T cell"]] - -[[!inline pages="tagged(T_cell)" actions="no" archive="yes" -feedshow=10]] diff --git a/tags/Treg.mdwn b/tags/Treg.mdwn deleted file mode 100644 index 744bf6a9..00000000 --- a/tags/Treg.mdwn +++ /dev/null @@ -1,4 +0,0 @@ -[[!meta title="pages tagged Treg"]] - -[[!inline pages="tagged(Treg)" actions="no" archive="yes" -feedshow=10]] diff --git a/tags/clonotype.mdwn b/tags/clonotype.mdwn deleted file mode 100644 index 25e95135..00000000 --- a/tags/clonotype.mdwn +++ /dev/null @@ -1,4 +0,0 @@ -[[!meta title="pages tagged clonotype"]] - -[[!inline pages="tagged(clonotype)" actions="no" archive="yes" -feedshow=10]] diff --git a/tags/priming..mdwn b/tags/priming..mdwn deleted file mode 100644 index bee9db76..00000000 --- a/tags/priming..mdwn +++ /dev/null @@ -1,4 +0,0 @@ -[[!meta title="pages tagged priming."]] - -[[!inline pages="tagged(priming.)" actions="no" archive="yes" -feedshow=10]] diff --git a/tags/random.mdwn b/tags/random.mdwn deleted file mode 100644 index ee7ac848..00000000 --- a/tags/random.mdwn +++ /dev/null @@ -1,4 +0,0 @@ -[[!meta title="pages tagged random"]] - -[[!inline pages="tagged(random)" actions="no" archive="yes" -feedshow=10]]