From: Charles Plessy Date: Thu, 23 Aug 2018 01:11:24 +0000 (+0900) Subject: ketchup X-Git-Url: https://source.charles.plessy.org/?a=commitdiff_plain;h=467832a90f4ccae42fe7804c8cff40bb6da9250e;p=source%2F.git ketchup --- diff --git a/biblio/30087105.mdwn b/biblio/30087105.mdwn new file mode 100644 index 00000000..ed9f085e --- /dev/null +++ b/biblio/30087105.mdwn @@ -0,0 +1,10 @@ +[[!meta title="Highly Contiguous Genome Assemblies of 15 Drosophila Species Generated Using Nanopore Sequencing."]] +[[!tag Drosophila Nanopore assembly]] + +G3 (Bethesda). 2018 Aug 7. pii: g3.200160.2018. doi:10.1534/g3.118.200160 + +Miller DE, Staber C, Zeitlinger J, Hawley RS. + +Highly Contiguous Genome Assemblies of 15 Drosophila Species Generated Using Nanopore Sequencing. + +[[!pmid 30087105 desc="29× coverage and N50 of 4.4. Mb in average. A multiplexed NextSeq 500 run was used for polishing. Optimisation of Nanopore throughput by reorganising pore groups periodically, extracting high molecular weight DNA with phenol/chloroform extration, and using more DNA in the library preparation. Benchmark of various tools including minimap/miniasm and canu."]]