From: Charles <charles.plessy@oist.jp>
Date: Mon, 7 Jan 2019 04:54:14 +0000 (+0900)
Subject: Café
X-Git-Url: https://source.charles.plessy.org/?a=commitdiff_plain;h=433931a2f4fda5bd469e4e6754f629ccb8a6119f;p=source.git

Café
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+[[!meta title="The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes."]]
+[[!tag genome alignment]]
+
+Treangen TJ, Ondov BD, Koren S, Phillippy AM.
+
+Genome Biol. 2014;15(11):524.
+
+The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes.
+
+[[!pmid 25410596 desc="Requires > 97% similarity between genomes.  Species with a too low Maximal Unit Match (MUM) index distance are not incorporated in the core genome alignment."]]