From: Charles Plessy Date: Wed, 25 Mar 2020 07:16:31 +0000 (+0900) Subject: eDNA X-Git-Url: https://source.charles.plessy.org/?a=commitdiff_plain;h=284d005804ef5c11740c0dd740764f3c102e9ffd;p=source.git eDNA --- diff --git a/biblio/31937756.mdwn b/biblio/31937756.mdwn new file mode 100644 index 00000000..6fe6ecc4 --- /dev/null +++ b/biblio/31937756.mdwn @@ -0,0 +1,12 @@ +[[!meta title="Environmental DNA reveals seasonal shifts and potential interactions in a marine community."]] +[[!tag Oikopleura eDNA]] + +Djurhuus A, Closek CJ, Kelly RP, Pitz KJ, Michisaki RP, Starks HA, Walz KR, +Andruszkiewicz EA, Olesin E, Hubbard K, Montes E, Otis D, Muller-Karger FE, +Chavez FP, Boehm AB, Breitbart M. + +Nat Commun. 2020 Jan 14;11(1):254. doi: 10.1038/s41467-019-14105-1. + +Environmental DNA reveals seasonal shifts and potential interactions in a marine community. + +[[!pmid desc="Found Oikopleura 18S sequences in MiSeq run SRR8473276."]] diff --git a/tags/Oikopleura.mdwn b/tags/Oikopleura.mdwn index 7a05fba5..20406bdb 100644 --- a/tags/Oikopleura.mdwn +++ b/tags/Oikopleura.mdwn @@ -557,7 +557,8 @@ Ecology - California ([[C. Essenbergm, 1922|biblio/1929090]]); rare in summer's warm (> 20ºC) waters and more abundant in winter's cool (13~16 ºC) waters. - - Throurought the North Pacific ([[Tokioka, 1960|biblio/10.5134_174644]]). + - Also found in eDNA form Monterey bay ([[Djurhuus and coll., 2020|biblio/31937756]]). + - Throurought the North Pacific ([[Tokioka, 1960|biblio/10.5134_174644]]). - Alaska, where it is more abundant in summer and near the coast ([[Doubleday and Hopcroft, 2015|biblio/10.1093_plankt_fbu092]]). - Giant appendicularians could be observed in high abundance from deep submersibles diff --git a/tags/eDNA.mdwn b/tags/eDNA.mdwn index 0d5ce17e..8187c113 100644 --- a/tags/eDNA.mdwn +++ b/tags/eDNA.mdwn @@ -2,5 +2,7 @@ - Oikopleura detected in 18S rRNA amplified with universal primers: [[Berry and coll., 2019|biblio/30735490]]. + - Oikopleura 18S detected in at least one MiSeq run from + [[Djurhuus and coll. 2020|biblio/31937756]] [[!inline pages="tagged(eDNA)" limit=0]]