From: Charles Date: Thu, 17 Sep 2020 06:31:54 +0000 (+0900) Subject: Café X-Git-Url: https://source.charles.plessy.org/?a=commitdiff_plain;h=2114a002e9612f437adcfc6b3d5c687de89b5b27;p=source%2F.git Café --- diff --git a/biblio/29330139.mdwn b/biblio/29330139.mdwn new file mode 100644 index 00000000..79ea63b7 --- /dev/null +++ b/biblio/29330139.mdwn @@ -0,0 +1,10 @@ +[[!meta title="Phylogenomics offers resolution of major tunicate relationships."]] +[[!tag Oikopleura tunicate evolution]] + +Kocot KM, Tassia MG, Halanych KM, Swalla BJ. + +Mol Phylogenet Evol. 2018 Apr;121:166-173. doi:10.1016/j.ympev.2018.01.005 + +Phylogenomics offers resolution of major tunicate relationships. + +[[!pmid 29330139 desc="A matrix of 798 genes totaling 254,865 amino acid positions places appendicularians as the sister group to all other tunicates."]] diff --git a/tags/Oikopleura.mdwn b/tags/Oikopleura.mdwn index ce6665c1..66ac8c68 100644 --- a/tags/Oikopleura.mdwn +++ b/tags/Oikopleura.mdwn @@ -38,8 +38,9 @@ Phylogeny clade is sister of Stolidobranchia (that is, not basal in Tunicates). Stolidobranchia. Nevertheless, it might be an artefact of AT-richness or long-branch attraction ([[Tsagkogeorga et al, 2009|biblio/19656395]]). - - Studies based on 146 genes in 28 species ([[Delsuc et al., 2006|biblio/16495997]]) - and then 258 orthologous proteins from 63 species ([[Delsuc et al., 2018|biblio/29653534]]) + - Studies based on 146 genes in 28 species ([[Delsuc et al., 2006|biblio/16495997]]), + on 798 genes in 28 species ([[Kocot and coll., 2018|biblio/29330139]]), + and 258 orthologous proteins from 63 species ([[Delsuc et al., 2018|biblio/29653534]]) show that Oikopleuridae is sister to all other tunicates. - “The difference between coding sequences was considerably higher in comparisons between strains of different oceans than within the Bergen gene