From: Charles Date: Wed, 25 Aug 2021 00:07:31 +0000 (+0900) Subject: Café X-Git-Url: https://source.charles.plessy.org/?a=commitdiff_plain;h=164a9c6069d34b3cc8c015147ae8bfb7cdad332f;p=source.git Café --- diff --git a/biblio/34078885.mdwn b/biblio/34078885.mdwn new file mode 100644 index 00000000..b52040a5 --- /dev/null +++ b/biblio/34078885.mdwn @@ -0,0 +1,10 @@ +[[!meta title="Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network."]] +[[!tag CAGE method fingerprint nanopore]] + +Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network. + +Nat Commun. 2021 Jun 2;12(1):3297. doi:10.1038/s41467-021-23143-7 + +Grapotte M, Saraswat M, Bessière C, Menichelli C, Ramilowski JA, Severin J, Hayashizaki Y, Itoh M, Tagami M, Murata M, Kojima-Ishiyama M, Noma S, Noguchi S, Kasukawa T, Hasegawa A, Suzuki H, Nishiyori-Sueki H, Frith MC; FANTOM consortium, Chatelain C, Carninci P, de Hoon MJL, Wasserman WW, Bréhélin L, Lecellier CH. + +[[!pmid 34078885 desc="Cap Trap RNA-seq (CTR) seq: sequencing of CAGE cDNAs on the Nanopore platform. RT primers contain some Us and the DNA/RNA hybrids are digested with USER to shorten the tail. A BBBBBBBB UMI is present."]]