Published in PLoS Comput Biol.

diff --git a/biblio/10.1101_261149.mdwn b/biblio/10.1101_261149.mdwn
deleted file mode 100644 (file)
index cf7b5e5..0000000
--- a/biblio/10.1101_261149.mdwn
+++ /dev/null
@@ -1,10 +0,0 @@
-[[!meta title="Integrating Hi-C links with assembly graphs for chromosome-scale assembly"]]
-[[!tag genome assembly method]]
-
-Jay Ghurye, Arang Rhie, Brian P. Walenz, Anthony Schmitt, Siddarth Selvaraj, Mihai Pop, Adam M. Phillippy, Sergey Koren
-
-bioRxiv, first February 07, 2018.
-
-Integrating Hi-C links with assembly graphs for chromosome-scale assembly
-
-[[!doi 10.1101/261149 desc="Uses unitigs and the assembly graph as input."]]

diff --git a/biblio/31433799.mdwn b/biblio/31433799.mdwn
new file mode 100644 (file)
index 0000000..2955057
--- /dev/null
+++ b/biblio/31433799.mdwn
@@ -0,0 +1,10 @@
+[[!meta title="Integrating Hi-C links with assembly graphs for chromosome-scale assembly"]]
+[[!tag genome assembly method]]
+
+PLoS Comput Biol. 2019 Aug 21;15(8):e1007273. doi:10.1371/journal.pcbi.1007273
+
+Jay Ghurye, Arang Rhie, Brian P. Walenz, Anthony Schmitt, Siddarth Selvaraj, Mihai Pop, Adam M. Phillippy, Sergey Koren
+
+Integrating Hi-C links with assembly graphs for chromosome-scale assembly
+
+[[!pmid 31433799 desc="Uses unitigs and the assembly graph as input."]]

diff --git a/tags/assembly.mdwn b/tags/assembly.mdwn
index b9f86208266e41f8d94ca06b510a57180fa7f1ee..9d5a00123b777cf1cbcb82b63efc2f64c17ffb3d 100644 (file)
--- a/tags/assembly.mdwn
+++ b/tags/assembly.mdwn
@@ -42,7 +42,7 @@ SALSA (Simple AssembLy ScAffolder, [[Ghurye and coll., 2017|biblio/28701198]])
 takes Hi-C data and contigs as input and scaffolds them under the hypothesis
 that most contact points are due to local (same-chromosome) proximity.  Version
 2 of SALSA uses unitigs and the assembly graph as input ([[Ghurye and coll.,
-2018|biblio/10.1101_261149]]).
+2019|biblio/31433799]]).
 
 BUSCO ([[Simão and coll., 2015|biblio/26059717]], [[Waterhouse and coll.,
 2017|biblio/29220515]]) assesses the presence of evolutionary conserved single-copy