Café

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+[[!meta title="Transcriptome reconstruction and functional analysis of eukaryotic marine plankton communities via high-throughput metagenomics and metatranscriptomics."]]
+[[!tag Oikopleura eDNA]]
+
+Vorobev A, Dupouy M, Carradec Q, Delmont TO, Annamalé A, Wincker P, Pelletier E.
+
+Genome Res. 2020 Apr;30(4):647-659. doi:10.1101/gr.253070.119
+
+Transcriptome reconstruction and functional analysis of eukaryotic marine plankton communities via high-throughput metagenomics and metatranscriptomics.
+
+[[!pmid 32205368 desc="Metagenomics-based transcriptomes (MGTs): metatranscriptomic-based unigenes of the MATOU-v1 catalog detected by metagenomic reads mapping in at least three different Tara Oceans samples and displaying no more than 90% of their total genomic occurrence signal in a single sample, grouped based on the covariation of their genomic abundance across the samples, with a minimum of 500 unigenes per group.  Oikopleuridae detected (Figure 1)."]]

diff --git a/tags/Oikopleura.mdwn b/tags/Oikopleura.mdwn
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--- a/tags/Oikopleura.mdwn
+++ b/tags/Oikopleura.mdwn
@@ -589,7 +589,7 @@ Ecology
    (with oral gland cells and ~8 to 14 subchordal cells).
  - Indian ocean near Australia: detected in eDNA sequencing of 18S rRNA
    ([[Berry and coll., 2019|biblio/30735490]])
-
+ - TARA Oceans ([[Vorobev and coll., 2020|biblio/32205368]]).
 
 Laboratory culture
 ------------------

diff --git a/tags/eDNA.mdwn b/tags/eDNA.mdwn
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+++ b/tags/eDNA.mdwn
@@ -4,5 +4,6 @@
    [[Berry and coll., 2019|biblio/30735490]].
  - Oikopleura 18S detected in at least one MiSeq run from
    [[Djurhuus and coll. 2020|biblio/31937756]]
+ - Oikopleuridae detected in TARA Oceans ([[Vorobev and coll., 2020|biblio/32205368]]).
 
 [[!inline pages="tagged(eDNA)" limit=0]]