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authorCharles <charles.plessy@oist.jp>
Thu, 10 Jan 2019 04:37:40 +0000 (13:37 +0900)
committerCharles <charles.plessy@oist.jp>
Thu, 10 Jan 2019 04:37:40 +0000 (13:37 +0900)
biblio/28407147.mdwn [new file with mode: 0644]
tags/assembly.mdwn

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+[[!meta title="HaploMerger2: rebuilding both haploid sub-assemblies from high-heterozygosity diploid genome assembly."]]
+[[!tag assembly]]
+
+Huang S, Kang M, Xu A.
+
+Bioinformatics. 2017 Aug 15;33(16):2577-2579. doi:10.1093/bioinformatics/btx220
+
+HaploMerger2: rebuilding both haploid sub-assemblies from high-heterozygosity diploid genome assembly.
+
+[[!pmid 28407147 desc="Produces a reference and an alternate assembly.  Scaffolding is improved by cross-comparison of the assemblies."]]
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 [[!meta title="pages tagged assembly"]]
 
-[[!inline pages="tagged(assembly)" actions="no" archive="yes"
-feedshow=10]]
+# Genome assembly software
+
+_In progress..._
+
+The HaploMerger2 pipeline ([[Huang and coll., 2017|biblio/28407147]]) takes a diploid
+assembly and outputs a reference and an alternative assembly for each haplotype.
+
+[[!inline pages="tagged(assembly)" actions="no" limit=0]]