CNEr

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+[[!meta title="CNEr: A toolkit for exploring extreme noncoding conservation."]]
+[[!tag enhancer software ]]
+
+Tan G, Polychronopoulos D, Lenhard B.
+
+PLoS Comput Biol. 2019 Aug 26;15(8):e1006940.
+
+CNEr: A toolkit for exploring extreme noncoding conservation.
+
+[[!pmid 31449516 desc="Takes genome alignments in Axt format as input."]]

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@@ -77,7 +77,8 @@ and coll., 2015|biblio/25940625]], Marie-Nelly and coll., 2014(not read)).
 
 Assemblies can be aligned with [[last-dotplot|LAST]] or, for SVG export and
 interactive browsing with D-GENIES ([[Cabanettes and Klopp
-2018|biblio/29888139]]).
+2018|biblio/29888139]]).  The CNEr package [[Tan, Polychronopoulos and Lenhard, 2019|biblio/31449516]]
+can be used to search for conserved non-coding elements.
 
 BUSCO ([[Simão and coll., 2015|biblio/26059717]], [[Waterhouse and coll.,
 2017|biblio/29220515]]) assesses the presence of evolutionary conserved