Ketchup

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+[[!meta title="Transcriptional burst frequency and burst size are equally modulated across the human genome."]]
+[[!tag single_cell transcription]]
+
+Dar RD, Razooky BS, Singh A, Trimeloni TV, McCollum JM, Cox CD, Simpson ML, Weinberger LS.
+
+Proc Natl Acad Sci U S A. 2012 Oct 23;109(43):17454-9. doi: 10.1073/pnas.1213530109
+
+Transcriptional burst frequency and burst size are equally modulated across the human genome.
+
+[[!pmid 23064634 desc="Large scale analysis of 8,000 loci by random insertion of lentiviral vectors."]]

diff --git a/biblio/23815980.mdwn b/biblio/23815980.mdwn
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+[[!meta title="Transcriptome analysis of human tissues and cell lines reveals one dominant transcript per gene."]]
+[[!tag transcriptome splicing non-coding]]
+
+Gonzalez-Porta M, Frankish A, Rung J, Harrow J, Brazma A.
+
+Genome Biol. 2013 Jul 1;14(7):R70.
+
+Transcriptome analysis of human tissues and cell lines reveals one dominant transcript per gene.
+
+[[!pmid 23815980 desc="The major transcript of 17 % of the protein-coding genes is non-coding.  Often, this is explained by a retained intron near the 3′ UTR.  The expression level of these non-coding major transcripts is lower than average."]]

diff --git a/biblio/23867226.mdwn b/biblio/23867226.mdwn
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+[[!meta title="Competitive interactions eliminate unfit embryonic stem cells at the onset of differentiation."]]
+[[!tag embryo cell-cell_interaction]]
+
+Sancho M, Di-Gregorio A, George N, Pozzi S, Sánchez JM, Pernaute B, Rodríguez TA.
+
+Dev Cell. 2013 Jul 15;26(1):19-30. doi: 10.1016/j.devcel.2013.06.012
+
+Competitive interactions eliminate unfit embryonic stem cells at the onset of differentiation.
+
+[[!pmid 23867226 desc="Lower expression of c-Myc protein, but not RNA trigger elimination by neighbors."]]

diff --git a/biblio/23870122.mdwn b/biblio/23870122.mdwn
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+[[!meta title="An epigenetic trap stabilizes singular olfactory receptor expression."]]
+[[!tag 8-oxo-G olfaction demethylase H3K9me3]]
+
+Cell. 2013 Jul 18;154(2):325-36. doi: 10.1016/j.cell.2013.06.039
+
+Lyons DB, Allen WE, Goh T, Tsai L, Barnea G, Lomvardas S.
+
+An epigenetic trap stabilizes singular olfactory receptor expression.
+
+[[!pmid 23870122 desc="8-oxoguanin as a readout of histone demethylation by LSD1."]]

diff --git a/biblio/23873083.mdwn b/biblio/23873083.mdwn
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+[[!meta title="Single-cell gene expression analysis reveals genetic associations masked in whole-tissue experiments."]]
+[[!tag single_cell eQTL]]
+
+Wills QF, Livak KJ, Tipping AJ, Enver T, Goldson AJ, Sexton DW, Holmes C.
+
+Nat Biotechnol. 2013 Jul 21. doi: 10.1038/nbt.2642
+
+Single-cell gene expression analysis reveals genetic associations masked in whole-tissue experiments.
+
+[[!pmid 23873083 desc="Uses HapMap cell lines for easy eQTL analysis."]]

diff --git a/biblio/23873938.mdwn b/biblio/23873938.mdwn
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+[[!meta title="Subnuclear partitioning of rRNA genes between the nucleolus and nucleoplasm reflects alternative epiallelic states."]]
+[[!tag mC nucleolus]]
+
+Pontvianne F, Blevins T, Chandrasekhara C, Mozgová I, Hassel C, Pontes OM, Tucker S, Mokros P, Muchová V, Fajkus J, Pikaard CS.
+
+Genes Dev. 2013 Jul 15;27(14):1545-50. doi: 10.1101/gad.221648.113
+
+Subnuclear partitioning of rRNA genes between the nucleolus and nucleoplasm reflects alternative epiallelic states.
+
+[[!pmid 23873938 desc="A proportion of the rDNA repeats are silenced in cells that are do not have the highest transcriptional activity."]]