Café

diff --git a/biblio/30974905.mdwn b/biblio/30974905.mdwn
new file mode 100644 (file)
index 0000000..176412f
--- /dev/null
+++ b/biblio/30974905.mdwn
@@ -0,0 +1,10 @@
+[[!meta title="ORTHOSCOPE Analysis Reveals the Presence of the Cellulose Synthase Gene in All Tunicate Genomes but Not in Other Animal Genomes."]]
+[[!tag Oikopleura cellulose]]
+
+Inoue J, Nakashima K, Satoh N.
+
+Genes (Basel). 2019 Apr 10;10(4). pii: E294. doi:10.3390/genes10040294
+
+ORTHOSCOPE Analysis Reveals the Presence of the Cellulose Synthase Gene in All Tunicate Genomes but Not in Other Animal Genomes.
+
+[[!pmid 30974905 desc="A second GH6 gene (with no CesA domain) was found in Tunicates."]]

diff --git a/tags/Oikopleura.mdwn b/tags/Oikopleura.mdwn
index 7f0bd9a3422cec9e406ecdb72e4f5c8589b5c0bd..6c68f951d8dafebff869fb1808759a148bbb79d5 100644 (file)
--- a/tags/Oikopleura.mdwn
+++ b/tags/Oikopleura.mdwn
@@ -175,6 +175,9 @@ Genes and pathways
    cellulose I was also found in _O. rufescens by_ [[Kimura and coll
    (2001)|biblio/11732199]]. The CesA gene is trans-spliced in the ascidian _Ciona
    intestinalis_ ([[Matthysse and coll., 2004|biblio/14722352]]).
+ - A GH6 (glycosyl hydrolase family 6) domain is found in the CesA genes,
+   as well as an independent genes, in Tunicates
+   ([[Inoue, Nakashima and Satoh, 2019|biblio/30974905]]).
  - _O. dioica_ has multiple CDK1 and Cyclin B paraplogs, some of which are
    implicated in oogenesis ([[Øvrebø and coll., 2015|biblio/25714331]],
    [[Feng & Thompson, 2018|biblio/29969934]]).
@@ -234,6 +237,8 @@ Genes and pathways
  - Components of the constitutive centromere-associated network (CCAN) of the
    inner kinetochore cound not be found in the genome by ([[Feng and coll.,
    2019|biblio/31306061]]).
+ - _Nodal_ is not found in _O. dioica_'s genome ([[Onuma and coll., 2020|biblio/32029598]]).
+
 
 Epigenome
 ---------
@@ -249,6 +254,7 @@ Epigenome
    phase, while in endocycling cells, it increases directly after the end of
    the S phase ([[Spada, Chioda and Thompson (2006)|biblio/15937898]]).
 
+
 Transcriptome
 -------------
 
@@ -283,6 +289,7 @@ Transcriptome
  - On the histone mRNAs, no purine-rich histone downstream element (HDE) was found
    by [[Chioda, Eskeland and Thompson in 2002|biblio/12446815]].
 
+
 Tools
 -----
 
@@ -339,7 +346,9 @@ Development
    the genome (doubling the genes would then double the amount of regulatory sequences).
  - Regular calcium waves are pulsing during embyogenesis.  Their propagation and
    synchronicity is severly disrupted by the knockdown of the connexins CxA and CxB
-   ([[Mikhaleva, Tolstenkov and Glover 2019|biblio/30905687]]).
+   ([[Mikhaleva, Tolstenkov and Glover 2019|biblio/30905687]]).  The calcium waves
+   are required for Bmp.a expression in descendants of the R (Right) blastomere
+   ([[Onuma and coll., 2020|biblio/32029598]]).
  - The tandem _propA_ and _propB_ genes control directly or indirectly _oik41a_
    and proper development of the house-secreting epithelium ([[Mikhaleva et
    al., 2018|biblio/30217597]]).